The detailed information of tRNA gene sequence


Sequence ID>SRA1004910
Genome IDSRR006906.181557
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 252
End posion on genome 176
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnncgg
tRNA gene sequence 
GTCTATGTAGCTCAGTTGGTTAGAGCACCGCACTCATAATGCGGGGGTCACAGGTTCAAG
TCCCGTCATAGCCACCA
Downstream region at tRNA end position 
ttttatagac
Secondary structure (Cloverleaf model)
>SRA1004910	Met	CAT
                   g      ACCA ttttatagac
                     G - C
                     T   C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      | |   | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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