The detailed information of tRNA gene sequence


Sequence ID>SRA1004912
Genome IDSRR006906.183334
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 237
End posion on genome 161
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
taaccagtgc
tRNA gene sequence
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position
ctttattcga
Secondary structure (Cloverleaf model)
>SRA1004912	Asp	GTC
                   c      GCCA ctttattcga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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