The detailed information of tRNA gene sequence


Sequence ID>SRA1004927
Genome IDSRR006906.185973
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 171
End posion on genome 244
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
attccaatac
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTAGGCTCCACtt
Downstream region at tRNA end position 
ttgttccttg
Secondary structure (Cloverleaf model)
>SRA1004927	Ala	TGC
                   c      ACtt ttgttccttg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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