The detailed information of tRNA gene sequence


Sequence ID>SRA1004931
Genome IDSRR006906.187140
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 176
End posion on genome 250
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttttagtaaa
tRNA gene sequence 
GCCGATGTAGCTCAGGGGTAGAGCAGCTCATTCGTAATGAGAAGGTCGAGGGTTCAATTC
CTTTCATCGGCACCA
Downstream region at tRNA end position 
gaataaatct
Secondary structure (Cloverleaf model)
>SRA1004931	Thr	CGT
                   a      ACCA gaataaatct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T T T C C     A
        G A        A      + | + | |     A
      G     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G   A
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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