The detailed information of tRNA gene sequence


Sequence ID>SRA1004936
Genome IDSRR006906.188367
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 52
End posion on genome 127
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gatataagct
tRNA gene sequence 
GGGGACTTAGCTTAGTTGGTAGAGCGCCTGCTTTGCACGCAGGAGGTCAGGAGTTCGACT
CTCCTAGTCTCCACCA
Downstream region at tRNA end position 
aatttcaaga
Secondary structure (Cloverleaf model)
>SRA1004936	Ala	TGC
                   t      ACCA aatttcaaga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     T - A          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       T T C G       A G G A G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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