The detailed information of tRNA gene sequence


Sequence ID>SRA1004947
Genome IDSRR006906.193084
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 7
End posion on genome 82
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnngttccc
tRNA gene sequence 
GGGCGATTAGCTCAGCGGGAGAGCACTTCGTTCACAACCGAAGGGGTCACTGGTTCGATC
CCAGTATCGCCCACCG
Downstream region at tRNA end position 
ggaaaggccg
Secondary structure (Cloverleaf model)
>SRA1004947	Val	CAC
                   c      ACCG ggaaaggccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGGTC
                    C   A
                    T - A
                    T + G
                    C   C
                    G - C
                  T       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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