The detailed information of tRNA gene sequence


Sequence ID>SRA1004956
Genome IDSRR006906.198158
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 175
End posion on genome 249
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttttagtaaa
tRNA gene sequence 
GCCGATGTAGCTCAGGGGTAGAGCAGCTCATTCGTAATGAGAAGGTCGAGGGTTCAATTC
CTTTCATCGGCACCA
Downstream region at tRNA end position 
gaataatctt
Secondary structure (Cloverleaf model)
>SRA1004956	Thr	CGT
                   a      ACCA gaataatctt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T T T C C     A
        G A        A      + | + | |     A
      G     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G   A
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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