The detailed information of tRNA gene sequence


Sequence ID>SRA1004965
Genome IDSRR006906.201541
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 267
End posion on genome 192
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnccccgtt
tRNA gene sequence 
GCCTCGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGTGGTTCGATT
CCGCCTCGAGGCACCA
Downstream region at tRNA end position 
tattttagat
Secondary structure (Cloverleaf model)
>SRA1004965	Phe	GAA
                   t      ACCA tattttagat
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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