The detailed information of tRNA gene sequence


Sequence ID>SRA1004977
Genome IDSRR006906.206504
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 38
End posion on genome 111
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
aaaaaagttt
tRNA gene sequence
GGCGCGTTAACAAAGCGGTTATGTAGCGGATTGCAAATCCGTCTAGTCCGGTTCGACTCC
GGAACGCGCCTCCA
Downstream region at tRNA end position
atttttcccg
Secondary structure (Cloverleaf model)
>SRA1004977	Cys	GCA
                   t      TCCA atttttcccg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     A G G C C     A
        G A        A      | | | | |     G
      C     A A C A       T C C G G     C
      G       | | |                 T T
      G     A T G T
        T T        A     CTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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