The detailed information of tRNA gene sequence


Sequence ID>SRA1004991
Genome IDSRR006906.212701
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 210
End posion on genome 134
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggcggcaga
tRNA gene sequence 
GGGGCGTTAGCTCAGCCGGTTAGAGCAGCGGACTCATAATCCGTCGGTCGCGGGTTCAAG
TCCCGCACGCCCCACCC
Downstream region at tRNA end position 
ttgtcctcgc
Secondary structure (Cloverleaf model)
>SRA1004991	Met	CAT
                   a      ACCC ttgtcctcgc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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