The detailed information of tRNA gene sequence


Sequence ID>SRA1004993
Genome IDSRR006906.213987
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 132
End posion on genome 45
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcgcccatt
tRNA gene sequence 
GGAAGGATGGCCGAGTGGTTTAAGGCAACGGTCTTGAAAACCGTCGAGTGTAACAGCTCC
CAGAGTTCGAATCTCTGTCCTTCCGCCA
Downstream region at tRNA end position 
aattcagccg
Secondary structure (Cloverleaf model)
>SRA1004993	Ser	TGA
                   t      GCCA aattcagccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAGTGTAACAGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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