The detailed information of tRNA gene sequence


Sequence ID>SRA1004998
Genome IDSRR006906.216068
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 97
End posion on genome 22
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacactcaa
tRNA gene sequence 
GGCCCTTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAGT
CCAGCAAGGGCCACCA
Downstream region at tRNA end position 
aatcattatt
Secondary structure (Cloverleaf model)
>SRA1004998	Met	CAT
                   a      ACCA aatcattatt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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