The detailed information of tRNA gene sequence


Sequence ID>SRA1005025
Genome IDSRR006906.228845
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 165
End posion on genome 90
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
caccctaatt
tRNA gene sequence
AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGT
CTCTCCGCCCCTGCCA
Downstream region at tRNA end position
gaaataatcc
Secondary structure (Cloverleaf model)
>SRA1005025	Trp	CCA
                   t      GCCA gaaataatcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G A G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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