The detailed information of tRNA gene sequence


Sequence ID>SRA1005040
Genome IDSRR006906.237134
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 115
End posion on genome 191
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
taaccagtgc
tRNA gene sequence
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position
cttatttaag
Secondary structure (Cloverleaf model)
>SRA1005040	Asp	GTC
                   c      GCCA cttatttaag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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