The detailed information of tRNA gene sequence


Sequence ID>SRA1005042
Genome IDSRR006906.237279
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 175
End posion on genome 249
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
actacacgaT
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATC
CCGNATAGCTCCATnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005042	Ala	TGC
                   T      ATnn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     A N G C C     A
      C G A        A      |   | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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