The detailed information of tRNA gene sequence


Sequence ID>SRA1005045
Genome IDSRR006906.238523
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 123
End posion on genome 214
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaagcgcat
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGNTATGCGGTCAAAAGCTG
CATCCGGGGTTCGAATCCCCGCCTCACCGCCA
Downstream region at tRNA end position 
tttgcatccg
Secondary structure (Cloverleaf model)
>SRA1005045	Ser	GCT
                   t      GCCA tttgcatccg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     ATGCGGTCAAAAGCTGCATC
                    C   T
                    T   N
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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