The detailed information of tRNA gene sequence


Sequence ID>SRA1005050
Genome IDSRR006906.243966
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 23
End posion on genome 112
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agccgccatt
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCCT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aatatttaaa
Secondary structure (Cloverleaf model)
>SRA1005050	Ser	TGA
                   t      GCCA aatatttaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     CGAGGGTGTGAGTCCTCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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