The detailed information of tRNA gene sequence


Sequence ID>SRA1005082
Genome IDSRR006907.13093
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 244
End posion on genome 172
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cggggcattt
tRNA gene sequence 
GCCGCCATAGCTCTAGCGGTAGAGCGTACCCTTGGTAAGGGTAAGGGCGTCGGTTCGAAT
CCGACTGGTGGCTtgg
Downstream region at tRNA end position 
ggttaccaag
Secondary structure (Cloverleaf model)
>SRA1005082	Thr	GGT
                   t      Ttgg ggttaccaag
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     A - T          T A
                    T     C A G C C     A
      G A T        A      | | | | |     G
    C       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGGC
                    T - A
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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