The detailed information of tRNA gene sequence


Sequence ID>SRA1005090
Genome IDSRR006907.18099
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 240
End posion on genome 152
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttatcagct
tRNA gene sequence 
GGATGGGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGGAGTAGGGGTTTACTCT
ACCGGGGGTTCGAATCCCTCCCCATCCGCtt
Downstream region at tRNA end position 
tgtgaaccag
Secondary structure (Cloverleaf model)
>SRA1005090	Ser	TGA
                   t      GCtt tgtgaaccag
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     AGTAGGGGTTTACTCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK