The detailed information of tRNA gene sequence


Sequence ID>SRA1005093
Genome IDSRR006907.20658
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 180
End posion on genome 95
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
catatcatat
tRNA gene sequence 
GCCGAAGTGGCGGAATGGCAGACGCGCCGGACTCAAAATCCGGTACCCTCAAAGGTGTGT
GGGTTCAAGTCCCACCTTCGGTACTA
Downstream region at tRNA end position 
tcccatattt
Secondary structure (Cloverleaf model)
>SRA1005093	Leu	CAA
                   t      ACTA tcccatattt
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G T G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TACCCTCAAAGGTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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