The detailed information of tRNA gene sequence


Sequence ID>SRA1005103
Genome IDSRR006907.25827
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 162
End posion on genome 248
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcagccatT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGAACGACTTGAAATCGTTTGAGGCGAAAGTCTCC
GAGGGTTCGAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position 
tataaaaaca
Secondary structure (Cloverleaf model)
>SRA1005103	Ser	TGA
                   T      GTtt tataaaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAGGCGAAAGTCTCC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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