The detailed information of tRNA gene sequence


Sequence ID>SRA1005105
Genome IDSRR006907.29788
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 205
End posion on genome 112
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
tgtttaatat
tRNA gene sequence 
GCCTCTGTAGTTTAGCGGTAAAACACCCGGCTTATACCCGGCACAGTCCCCAGATTAGGG
AGCGTCGGTGGTTCGAATCCACCCGGAGGTACCA
Downstream region at tRNA end position 
aatttatgca
Secondary structure (Cloverleaf model)
>SRA1005105	Ile	TAT
                   t      ACCA aatttatgca
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T A
                    T     C C A C C     A
        G A        A      | | | | |     G
      C     T T T G       G G T G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ACAGTCCCCAGATTAGGGAGCGTC
                    C   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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