The detailed information of tRNA gene sequence


Sequence ID>SRA1005106
Genome IDSRR006907.29788
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 104
End posion on genome 30
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccaaatttat
tRNA gene sequence 
GCACGGTTCGTCTATCGGTTAGGACACAAGCCTTTCACGTTTGTAAGACGGGTTCGATTC
CCGTACCGTGTACCA
Downstream region at tRNA end position 
tacaatggtt
Secondary structure (Cloverleaf model)
>SRA1005106	Glu	TTC
                   t      ACCA tacaatggtt
                     G + T
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAG
                    C - G
                    A - T
                    A - T
                    G + T
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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