The detailed information of tRNA gene sequence


Sequence ID>SRA1005107
Genome IDSRR006907.31484
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 77
End posion on genome 152
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaataacaat
tRNA gene sequence 
GCGCTTGTAGCTCAATGGTTAGAGCAGTGGACTCATAATCCATTGGTTAGGGGTTCAAGT
CCCTTCAAGCGTACCA
Downstream region at tRNA end position 
aaaatttagg
Secondary structure (Cloverleaf model)
>SRA1005107	Met	CAT
                   t      ACCA aaaatttagg
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T A A        A      | + | | |     A
    G       C T C G       A G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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