The detailed information of tRNA gene sequence


Sequence ID>SRA1005110
Genome IDSRR006907.35237
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 275
End posion on genome 202
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggggtaaat
tRNA gene sequence 
CGCGGGATGTGGAAGATGGTTATCCGCTCGGTCTCATAAACCGAGATCGCCGGTTCGAAT
CCGGCTCCCGCAACtt
Downstream region at tRNA end position 
aaagggtgga
Secondary structure (Cloverleaf model)
>SRA1005110	Met	CAT
                   t      ACtt aaagggtgga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G C C     A
      A G A        G      | | | | |     G
    T       A G G T       G C C G G     C
    G       | | | +                 T T
    G       T C C G
      T T A        C     GATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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