The detailed information of tRNA gene sequence


Sequence ID>SRA1005118
Genome IDSRR006907.42755
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 55
End posion on genome 142
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttgtttaT
tRNA gene sequence 
GGGTAAATGGCCGAGCGGTTTAAGGCAGCAGTCTTGAAAACTGCCGTGGTTAGTAGCCAC
CGTGGGTTCGAATCCTACTTTACCCGTtt
Downstream region at tRNA end position 
tcctatattt
Secondary structure (Cloverleaf model)
>SRA1005118	Ser	TGA
                   T      GTtt tcctatattt
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGTTAGTAGCCACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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