The detailed information of tRNA gene sequence


Sequence ID>SRA1005119
Genome IDSRR006907.43859
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 161
End posion on genome 233
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
caaaaaatat
tRNA gene sequence 
GCCCCTAAAGCATTAAGTGGCGATGTACCTGACTTGTAATCAGGAGAGGATGGTTCAATT
CCGTCTGGGGGCTtaa
Downstream region at tRNA end position 
gttcatacgg
Secondary structure (Cloverleaf model)
>SRA1005119	Thr	TGT
                   t      Ttaa gttcatacgg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    A     C T G C C     A
      A A T        A      | | + | |     A
    G       T A C G       G A T G G     C
    T       | | | +                 T T
    G       A T G T
      G C G        A     AGAG
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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