The detailed information of tRNA gene sequence


Sequence ID>SRA1005121
Genome IDSRR006907.45092
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 249
End posion on genome 172
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gtttaatatt
tRNA gene sequence 
GCGGATGTAGTCCAACTAGGTAGAGGCAATAGGCTCAAACCCTATACAGTGTGAGTTCGA
ATCTCACCATCCGTACCA
Downstream region at tRNA end position 
attttaagga
Secondary structure (Cloverleaf model)
>SRA1005121	Leu	CAA
                   t      ACCA attttaagga
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A C T C     A
    T C A A        A      | | | | |     G
  A         C C T G       G T G A G     C
  G           | + |                 T T
  G         A G G C
    T A G          A     ACAGT
                    A - T
                    T - A
                    A - T
                    G - C
                    G - C
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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