The detailed information of tRNA gene sequence


Sequence ID>SRA1005122
Genome IDSRR006907.45128
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 145
End posion on genome 220
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcctgcttac
tRNA gene sequence 
GGCCCATCGGTCCAGCCTGGAGTGGACGCTGCCCTGTCACGGCGGAGATCACCGGTTCGA
ATCCGGTATGGGTCGCtt
Downstream region at tRNA end position 
gtaggattag
Secondary structure (Cloverleaf model)
>SRA1005122	Asp	GTC
                   c      GCtt gtaggattag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    C     T G G C C     A
    C C G A        G      | | | | |     G
  T         C C T G       A C C G G     C
  G         | | | |                 T T
  G         G G A C
    A G T          G     AGATC
                    C - G
                    T + G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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