The detailed information of tRNA gene sequence


Sequence ID>SRA1005123
Genome IDSRR006907.45993
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 173
End posion on genome 97
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tagagctaaT
tRNA gene sequence 
GTCCCTATCGTCTAGCCTGGCCTAGGACGTGACCCTTTCACGGTCAAGACACGGGTTCGA
ATCCCGTTGGGGACAAtc
Downstream region at tRNA end position 
ccgacctttt
Secondary structure (Cloverleaf model)
>SRA1005123	Glu	TTC
                   T      AAtc ccgacctttt
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        G     AGAC
                    T - A
                    G - C
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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