The detailed information of tRNA gene sequence


Sequence ID>SRA1005124
Genome IDSRR006907.46280
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 168
End posion on genome 244
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tttaaataac
tRNA gene sequence 
GGCTCCGTAGCTCAGCTGGATAGAGCAACTGCCTTCGAAGCAGTGGGTCGGAGGTTCGAA
TCCTTCCGGGGTCGCCA
Downstream region at tRNA end position 
aatatctttc
Secondary structure (Cloverleaf model)
>SRA1005124	Arg	TCG
                   c      GCCA aatatctttc
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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