The detailed information of tRNA gene sequence


Sequence ID>SRA1005128
Genome IDSRR006907.52321
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 52
End posion on genome 142
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taagacatat
tRNA gene sequence 
GGAGAGTTGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCGTGTGAGCGT
ACCTAGGGTTCGAATCCCTAACTCTCCGCCA
Downstream region at tRNA end position 
tttaaattta
Secondary structure (Cloverleaf model)
>SRA1005128	Ser	TGA
                   t      GCCA tttaaattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       T A G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTGCGTGTGAGCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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