The detailed information of tRNA gene sequence


Sequence ID>SRA1005129
Genome IDSRR006907.52321
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 181
End posion on genome 271
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaggcacgt
tRNA gene sequence 
GGAGAATTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGCGTAGGTCGGGTAACTGG
CGCCCGGGTTCAAATCCCGGATTCTCCGCCA
Downstream region at tRNA end position 
aaacatctag
Secondary structure (Cloverleaf model)
>SRA1005129	Ser	GCT
                   t      GCCA aaacatctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       A C T C       C C G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGTAACTGGCGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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