The detailed information of tRNA gene sequence


Sequence ID>SRA1005139
Genome IDSRR006907.57137
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 199
End posion on genome 125
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggctaaccga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACtt
Downstream region at tRNA end position 
aagaaaaagg
Secondary structure (Cloverleaf model)
>SRA1005139	Met	CAT
                   a      ACtt aagaaaaagg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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