The detailed information of tRNA gene sequence


Sequence ID>SRA1005142
Genome IDSRR006907.58009
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 116
End posion on genome 189
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ctttaagaat
tRNA gene sequence 
GCGGGGTTAGTACATTGGTAGTACATAAGCTTCCCAAGCTTAAAAGGCGGGTTCGATTCC
CGTACCCCGCTCCA
Downstream region at tRNA end position 
tgaatttata
Secondary structure (Cloverleaf model)
>SRA1005142	Gly	CCC
                   t      TCCA tgaatttata
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     T G C C C     A
        T A        A      + | | | |     G
      T     C A T G       G C G G G     C
      G     | | | |                 T T
      G     G T A C
        T A        A     AAAG
                    T - A
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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