The detailed information of tRNA gene sequence


Sequence ID>SRA1005144
Genome IDSRR006907.61537
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 198
End posion on genome 126
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcccgcttc
tRNA gene sequence 
GGGCGTATAGCTCAGCGGTTAGAGCAGGGCACTCATAATGCCTTGGTCCTAGGTTCGAAT
CCTAGTACGCCCAttt
Downstream region at tRNA end position 
attaaattat
Secondary structure (Cloverleaf model)
>SRA1005144	Met	CAT
                   c      Attt attaaattat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     G A T C C     A
      C G A        A      | | | | |     G
    G       C T C G       C T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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