The detailed information of tRNA gene sequence


Sequence ID>SRA1005149
Genome IDSRR006907.64028
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 102
End posion on genome 173
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caggacctct
tRNA gene sequence 
GGTGGAGTGGCCGAGAGGCGAGGCAAGGGACTGCAAATCCCTCTACACGGGTTCAAATCC
CGTCTCCACCTCgg
Downstream region at tRNA end position 
agcaacaccg
Secondary structure (Cloverleaf model)
>SRA1005149	Cys	GCA
                   t      TCgg agcaacaccg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        G      | | | | |     A
      A     G C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        C G        A     CTAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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