The detailed information of tRNA gene sequence


Sequence ID>SRA1005152
Genome IDSRR006907.68685
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 89
End posion on genome 1
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caagcaaatT
tRNA gene sequence 
GGAAAGGTGGCAGAGTGGTTGAATGCTCTGGTTTTGAAAACCAGCGTGGCTGTATGGTCA
CCGGGGGTTCGAATCCCTCCCTTTCCGAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005152	Ser	TGA
                   T      GAnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        T     CGTGGCTGTATGGTCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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