The detailed information of tRNA gene sequence


Sequence ID>SRA1005158
Genome IDSRR006907.72169
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 171
End posion on genome 243
Amino Acid Unknown
Anticodon TNT
Upstream region at tRNA start position 
gggtactcaa
tRNA gene sequence 
GGGTGCGTAGCATAATGGATAATGCATCAACCTTNTAAGTTGCCGACTGTAGGTTCGAGT
CCTACCGCACCTGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005158	Unknown	TNT
                   a      Gnnn nnnnnnnnnn
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    G       T A C G       G T A G G     C
    G       | | | |                 T T
    A       A T G C
      T A          A     CGACT
                    T   C
                    C - G
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T N T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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