The detailed information of tRNA gene sequence


Sequence ID>SRA1005159
Genome IDSRR006907.72246
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 78
End posion on genome 2
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcgggacga
tRNA gene sequence 
AGGGCAGTAGCTCAATTGGCTAGAGTTGCCGTCTCCAAAGCGGCCGGTTGGGGGTTCGAG
TCCCTCCTGCCCTGCAA
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005159	Trp	CCA
                   a      GCAA cnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        T     CGGTT
                    G - C
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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