The detailed information of tRNA gene sequence


Sequence ID>SRA1005163
Genome IDSRR006907.74723
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 6
End posion on genome 95
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnctagg
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGGGCAACTCCA
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
ttttttattt
Secondary structure (Cloverleaf model)
>SRA1005163	Ser	TGA
                   g      GCCA ttttttattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGGGCAACTCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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