The detailed information of tRNA gene sequence


Sequence ID>SRA1005171
Genome IDSRR006907.79679
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 287
End posion on genome 213
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
nnnnngccag
tRNA gene sequence 
TGGGGTATGGGGTAATTGGCAGCCCAGCGGTTTCTGAATCCGCTTGTCTAGGTTCGAGTC
CTAGTACCCCAGCAA
Downstream region at tRNA end position 
aaagtaaacg
Secondary structure (Cloverleaf model)
>SRA1005171	Gln	CTG
                   g      GCAA aaagtaaacg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G A T C C     A
      T A A        G      | | | | |     G
    T       T G G G       C T A G G     C
    G       + | | |                 T T
    G       G C C C
      C A          A     TTGT
                    G - C
                    C - G
                    G - C
                    G - C
                    T   T
                  T       A
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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