The detailed information of tRNA gene sequence


Sequence ID>SRA1005177
Genome IDSRR006907.82045
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 180
End posion on genome 105
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aagcccttca
tRNA gene sequence 
GGTCAGGTAGCTCAACTGGTAGAGTGTTTGGTTTGTCGCCGAGCGGCTGCGGGTTCGAAT
CCCGCCCTGACTGCAA
Downstream region at tRNA end position 
tcgcacccgt
Secondary structure (Cloverleaf model)
>SRA1005177	Thr	TGT
                   a      GCAA tcgcacccgt
                     G + T
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C A A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     CGGCT
                    T + G
                    T - A
                    T + G
                    G - C
                    G - C
                  T       G
                  T       C
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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