The detailed information of tRNA gene sequence


Sequence ID>SRA1005178
Genome IDSRR006907.82045
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 102
End posion on genome 26
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gactgcaatc
tRNA gene sequence 
GCACCCGTAGCTCAGTAGGATAGAGCAACTGCCTTCTAAGCAGTCGGCCACAGGTTCGAA
TCCTGTCGGGTGTACAA
Downstream region at tRNA end position 
ttcaattcaa
Secondary structure (Cloverleaf model)
>SRA1005178	Arg	TCT
                   c      ACAA ttcaattcaa
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    A       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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