The detailed information of tRNA gene sequence


Sequence ID>SRA1005189
Genome IDSRR006907.91603
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 87
End posion on genome 162
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctccctataa
tRNA gene sequence 
GCCCCCTTAGCTCAGTTGGTAGAGCCACTGATTTGTAATCAGTAGGTCGTTGGTTCGAGT
CCGACAGGGGGCTCAA
Downstream region at tRNA end position 
cataggttga
Secondary structure (Cloverleaf model)
>SRA1005189	Thr	TGT
                   a      TCAA cataggttga
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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