The detailed information of tRNA gene sequence


Sequence ID>SRA1005191
Genome IDSRR006907.93279
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 225
End posion on genome 299
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggttggcgT
tRNA gene sequence 
GGGACCGTAGCTCAACGGTTAGAGCAGGGGACTCATAATCCCTTGGTTCTCGGTTCGAAT
CCGGGCGGTCCTAGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005191	Met	CAT
                   T      AGnn nnnnnnnnnn
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C A A        A      | + | | |     G
    G       C T C G       C T C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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