The detailed information of tRNA gene sequence


Sequence ID>SRA1005196
Genome IDSRR006907.96300
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 96
End posion on genome 7
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaagaataa
tRNA gene sequence 
GGAAACGTGGCAGAGCCTGGTTTATTGCACCGGTCTTGAAAACCGACGACTGGCAACGGT
CCGTGAGTTCGAATCTCACCGTTTCCGCCA
Downstream region at tRNA end position 
ataacgnnnn
Secondary structure (Cloverleaf model)
>SRA1005196	Ser	TGA
                   a      GCCA ataacgnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C A C T C     A
    C C G A        G      | | | | |     G
  T         G A C G       G T G A G     C
  G         + | | |                 T T
  G         T T G C
    T T T A        A     CGACTGGCAACGGTCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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