The detailed information of tRNA gene sequence


Sequence ID>SRA1005200
Genome IDSRR006907.98399
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 117
End posion on genome 45
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atagatgttt
tRNA gene sequence 
GCCTCAATAACTCAGTTGGTAGAGTGTCGCACTTGTAATGCGAATGTCGGGGTTCGACTC
CCTCTTGAGGCTCtg
Downstream region at tRNA end position 
gaaggatagg
Secondary structure (Cloverleaf model)
>SRA1005200	Thr	TGT
                   t      TCtg gaaggatagg
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          T C
                    T     C T C C C     A
      T G A        A        + | | |     G
    T       C T C A       C G G G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     ATGT
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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