The detailed information of tRNA gene sequence


Sequence ID>SRA1005201
Genome IDSRR006907.98478
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 187
End posion on genome 98
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggccttcttt
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCGAAAGCGGCGGTCTTGAAAACCGTTGAACTCGCAAGGGTT
CCGGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tttatcatta
Secondary structure (Cloverleaf model)
>SRA1005201	Ser	TGA
                   t      GCCA tttatcatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G T C G       G G G A G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACTCGCAAGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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