The detailed information of tRNA gene sequence


Sequence ID>SRA1005204
Genome IDSRR006907.101660
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 80
End posion on genome 156
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttcctgatt
tRNA gene sequence 
GGCGGCGTAGCTCAGCTGGTTAGAGCACGGCACTCATAATGCCGGGGTCAGCGGTTCAAG
TCCGCTCGCCGCTACCA
Downstream region at tRNA end position 
tttttcccat
Secondary structure (Cloverleaf model)
>SRA1005204	Met	CAT
                   t      ACCA tttttcccat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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